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O'Reilly Genomics in the Cloud - Docker, GATK, and WDL Guide

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Description

As genomic data expands into the petabyte scale, researchers face the massive challenge of accessing and analyzing information stored in cloud infrastructure. This practical guide from O'Reilly provides a roadmap for navigating this data explosion. It focuses on how to adapt analysis tools and protocols to work effectively within cloud environments. Readers will gain hands-on experience using open source tools to manage large-scale genomic algorithms. The book covers essential technologies including the Genome Analysis Toolkit (GATK), Docker, WDL, and the Terra platform. By following this technical approach, researchers can learn to handle the volume of data being hosted by organizations like the National Institutes of Health (NIH) and turn cloud-based resources into actionable insights.

Key Features

Learn to manage massive genomic datasets by utilizing cloud infrastructure and modern analysis protocols.

Master open source tools including the Genome Analysis Toolkit (GATK) for efficient genomic research.

Gain practical experience with Docker and WDL to containerize and automate your bioinformatics workflows.

Explore the Terra platform to streamline how you access and process large-scale genomic data.

Prepare for the future of genomics by understanding how to scale analysis to meet petabyte-level demands.

Product Specifications

Format
paperback
Domain
Amazon UK
Release Date
24 April 2020
Listed Since
28 April 2017

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